Package: simboot 0.2-8

simboot: Simultaneous Inference for Diversity Indices

Provides estimation of simultaneous bootstrap and asymptotic confidence intervals for diversity indices, namely the Shannon and the Simpson index. Several pre--specified multiple comparison types are available to choose. Further user--defined contrast matrices are applicable. In addition, simboot estimates adjusted as well as unadjusted p--values for two of the three proposed bootstrap methods. Further simboot allows for comparing biological diversities of two or more groups while simultaneously testing a user-defined selection of Hill numbers of orders q, which are considered as appropriate and useful indices for measuring diversity.

Authors:Ralph Scherer [cre, aut], Philip Pallmann [aut]

simboot_0.2-8.tar.gz
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simboot_0.2-8.tgz(r-4.4-any)simboot_0.2-8.tgz(r-4.3-any)
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simboot.pdf |simboot.html
simboot/json (API)
NEWS

# Install 'simboot' in R:
install.packages('simboot', repos = c('https://shearer.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/shearer/simboot/issues

Datasets:
  • Bacteria - Relative Abundances of Soil Bacteria
  • predatGM - Abundance data of predatory insects
  • saproDipGM - Abundance data of Diptera with saprophagous larvae

On CRAN:

3.30 score 2 stars 20 scripts 198 downloads 1 mentions 19 exports 2 dependencies

Last updated 10 months agofrom:b3d2bf95b9. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 05 2024
R-4.5-winOKNov 05 2024
R-4.5-linuxOKNov 05 2024
R-4.4-winOKNov 05 2024
R-4.4-macOKNov 05 2024
R-4.3-winOKNov 05 2024
R-4.3-macOKNov 05 2024

Exports:ashtBoutrpCCdrpcontrMatcorrmatgenestShannonestShannonfestShannonWYestSimpsonestSimpsonfestThetaRowmcpHillrphtsbdivSCIrpSimpsontshtwaldciWYht

Dependencies:bootmvtnorm