Package: simboot 0.2-8

simboot: Simultaneous Inference for Diversity Indices

Provides estimation of simultaneous bootstrap and asymptotic confidence intervals for diversity indices, namely the Shannon and the Simpson index. Several pre--specified multiple comparison types are available to choose. Further user--defined contrast matrices are applicable. In addition, simboot estimates adjusted as well as unadjusted p--values for two of the three proposed bootstrap methods. Further simboot allows for comparing biological diversities of two or more groups while simultaneously testing a user-defined selection of Hill numbers of orders q, which are considered as appropriate and useful indices for measuring diversity.

Authors:Ralph Scherer [cre, aut], Philip Pallmann [aut]

simboot_0.2-8.tar.gz
simboot_0.2-8.zip(r-4.7-any)simboot_0.2-8.zip(r-4.6-any)simboot_0.2-8.zip(r-4.5-any)
simboot_0.2-8.tgz(r-4.6-any)simboot_0.2-8.tgz(r-4.5-any)
simboot_0.2-8.tar.gz(r-4.7-any)simboot_0.2-8.tar.gz(r-4.6-any)
simboot_0.2-8.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
simboot/json (API)

# Install 'simboot' in R:
install.packages('simboot', repos = c('https://shearer.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/shearer/simboot/issues

Datasets:
  • Bacteria - Relative Abundances of Soil Bacteria
  • predatGM - Abundance data of predatory insects
  • saproDipGM - Abundance data of Diptera with saprophagous larvae

On CRAN:

Conda:

3.28 score 2 stars 19 scripts 269 downloads 1 mentions 19 exports 2 dependencies

Last updated from:b3d2bf95b9. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK113
source / vignettesOK151
linux-release-x86_64OK105
macos-release-arm64OK87
macos-oldrel-arm64OK103
windows-develOK67
windows-releaseOK61
windows-oldrelOK61
wasm-releaseOK88

Exports:ashtBoutrpCCdrpcontrMatcorrmatgenestShannonestShannonfestShannonWYestSimpsonestSimpsonfestThetaRowmcpHillrphtsbdivSCIrpSimpsontshtwaldciWYht

Dependencies:bootmvtnorm